SubtiBank SubtiBank
ydzE [2019-06-19 10:19:57]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

ydzE [2019-06-19 10:19:57]

unknown
locus
BSU05140
pI
6.92
mw
8.40 kDa
protein length
78 aa Sequence Blast
gene length
237 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    561,180 → 561,416

    Expression and Regulation

    Operons

    genes
    [gene|24A86A4846187E6026A2B7645DC4B7C70908942E|ydeC]-[gene|CBEB1C62D727CF320E82C3ED636894B50F11E0AE|ydzE]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|11532142], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-C165 (ydzE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2163 NBRP B. subtilis, Japan]
  • BKE05140 (Δ[gene|CBEB1C62D727CF320E82C3ED636894B50F11E0AE|ydzE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAAGGCCACCTAGAATTT, downstream forward: _UP4_TAACAAAAAAAAGCAAACTA
  • BKK05140 (Δ[gene|CBEB1C62D727CF320E82C3ED636894B50F11E0AE|ydzE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAAGGCCACCTAGAATTT, downstream forward: _UP4_TAACAAAAAAAAGCAAACTA